Welcome to R-DeeP

- Database for RNA-dependent Proteins -








Human Protein of Interest

Enter a protein name into the search field:






List of Human Proteins

Enter a list of proteins or genes into the search field:










Comparative table of mammalian RNA-binding protein resources

The studies were conducted in different mammalian cell lines ranging from mouse embryonic stem cells to HeLa or HuH7 cells.






A detailed and user-friendly documentation can be downloaded here:



How to cite:

Caudron-Herger et al., R-DeeP: proteome-wide and quantitative identification of RNA-dependent proteins by density gradient ultracentrifugation

2019, Molecular Cell 75, 1–16

doi.org/10.1016/j.molcel.2019.04.018


A detailed analysis pipeline and test dataset including examples can be downloaded here:




How to cite:

Caudron-Herger et al., R-DeeP: proteome-wide and quantitative identification of RNA-dependent proteins by density gradient ultracentrifugation

2019, Molecular Cell 75, 1–16

doi.org/10.1016/j.molcel.2019.04.018


The authors of the R-DeeP database can be contacted at the following email address:

databases.diederichslab(at)dkfz.de